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Publications 2022

Publications 2022
Articles and book chapters published in 2022 (update November 2022)

Articles

Ahongo, Y.D., Le Cam, A., Montfort, J., Bugeon, J., Lefèvre, F., Rescan, P.Y. 2022. Gene expression profiling of trout muscle during flesh quality recovery following spawning. BMC Genomics 23(1):9 [DOI]

Bertho, S., Herpin, A., Jouanno, E., Yano, A., Bobe, J., Parrinello, H., Journot, L., Guyomard, R., Muller, T., Swanson, P., McKinney, G., Williamson, K., Meek, M., Schartl, M., Guiguen, Y. 2022. A nonfunctional copy of the salmonid sex-determining gene (sdY) is responsible for the "apparent" XY females in Chinook salmon, Oncorhynchus tshawytscha. G3 (Bethesda):12(2):jkab451 [DOI]

Brunet, V., Kleiber, A., Patinote, A., Sudan, P.L., Duret, C., Gourmelen, G., Moreau, E., Fournel, C., Pineau, L ., Calvez, S. Milla, S., Colson, V. 2022. Positive welfare effects of physical enrichments from the nature-, functions- and feeling- based approaches in farmed rainbow trout (Oncorhynchus mykiss). Aquaculture 550 : Article Number737825 [DOI]

Cardona, E., Segret, E., Cachelou, Y., Vanderesse, T., Larroquet, L., Hermann, A., Surget, A., Corraze, G., Cachelou, F., Bobe, J., Skiba-Cassy, S. 2022. Effect of micro-algae Schizochytrium sp. supplementation in plant diet on reproduction of female rainbow trout (Oncorhynchus mykiss): maternal programming impact of progeny. Journal of Animal Science and Biotechnology 13(1): 33 [DOI]

Cardona, E., Brunet, V., Baranek, E., Milhade, L., Skiba-Cassy, S., Bobe, J., Calandreau, L., Roy, J., Colson, V. 2022. Physical Enrichment Triggers Brain Plasticity and Influences Blood Plasma Circulating miRNA in Rainbow Trout (Oncorhynchus mykiss). Biology (Basel) 22;11(8):1093 [DOI]

Cardona, E., Milhade, L., Pourtau., A, Panserat, S., Terrier, F., Lanuque, A., Roy, J., Marandel, L., Bobe, J., Skiba-Cassy, S. 2022. Tissue origin of circulating microRNAs and their response to nutritional and environmental stress in rainbow trout (Oncorhynchus mykiss). Science of The Total Environment 853(158584) [DOI]

Degrande, R., Cornilleau, F., Lansade, L., Jardat, P., Colson, V., Calandreau, L. 2022. Domestic hens succeed at serial reversal learning and perceptual concept generalisation using a new automated touchscreen device. Animal 16(8): 100607 [DOI]

Desvignes, T., Bardou, P., Montfort, J., Sydes, J., Guyomar, C., George, S., Postlethwait, J.H., Bobe, J. 2022. FishmiRNA: An evolutionarily supported microRNA annotation and expression database for ray-finned fishes, Molecular Biology and Evolution msac004 [DOI]

Du, K., Pippel, M., Kneitz, S., Feron, R., da Cruz, I., Winkler, S., Wilde, B., Avila Luna, E.G., Myers, G., Guiguen, Y., Macias Garcia, C., Schartl, M. 2022. Genome biology of the darkedged splitfin, Girardinichthys multiradiatus, and the evolution of sex chromosomes and placentation. Genome Research 32(3): 583-594 [DOI]

Jasonowicz, A.J., Simeon, A., Zahm, M., Cabau, C., Klopp, C., Roques, C., Iampietro, C., Lluch, J., Donnadieu, C., Parrinello, H., Drinan, D.P., Hauser, L., Guiguen, Y., Planas, J.V. 2022. Generation of a chromosome-level genome assembly for Pacific halibut (Hippoglossus stenolepis) and characterization of its sex-determining genomic region. Molecular Ecology Resources 22(7):2685-2700 [DOI]

Kleiber, A., Le-Calvez, J.M., Kerneis, T., Batard, A., Goardon, L., Labbe, L., Brunet, V., Ferreira, V.H.B., Guesdon, V., Calandreau, L., Colson, V. 2022. Positive effects of bubbles as a feeding predictor on behaviour of farmed rainbow trout. Scientific Reports 12(1) [DOI]

Klopp, C., Milhes, M., Guiguen, Y. 2022. Development of a polymerase chain reaction (PCR) based genetic sex identification method in the chub mackerel Scomber japonicus and blue mackerel S. australasicus. Nippon Suisan Gakkaishi 88(4): 203-203 [DOI] [in Japanese]

Martinez-Bengochea, A.L., Kneitz, S., Herpin, A., Nobrega, R.H., Adolfi, M.C., Schartl, M. 2022. Sexual development dysgenesis in interspecific hybrids of Medaka fish. Scientific Reports 12, 5408 [DOI]

Merdrignac, C., Clément, A.E., Montfort, J., Murat, F., Bobe, J. 2022. auts2 Features and Expression Are Highly Conserved during Evolution Despite Different Evolutionary Fates Following Whole Genome Duplication. Cells 11(17): 2694 [DOI]

Nynca, J., Zarski, D., Frohlich, T., Koster, M., Bobe, J., Ciereszko, A. 2022. Comparative proteomic analysis reveals the importance of the protective role of ovarian fluid over eggs during the reproduction of pikeperch. Aquaculture 548 (Part2): Article Number 737656 [DOI]

Pan, Q., Herpin, A., Guiguen, Y. 2022. Inactivation of the Anti-Müllerian Hormone Receptor Type 2 (amhrII) Gene in Northern Pike (Esox lucius) Results in Male-To-Female Sex Reversal. Sexual Development 1-6 [DOI]

Parey, E., Louis, A., Montfort, J., Guiguen, Y., Crollius, H.R., Berthelot, C. 2022. An atlas of fish genome evolution reveals delayed rediploidization following the teleost whole-genome duplication. Genome Research 32(9): 1685-1697 [DOI]

Prache, S., Lebret, B., Baéza, E., Martin, B., Gautron, J., Feidt, C., Médale, F., Corraze, G., Raulet, M., Lefèvre, F., Verrez-Bagnis, V., Sans, P. 2022. Review: Quality and authentication of organic animal products in Europe. Animal 16 Suppl 1: 100405 [DOI]

Prache, S., Adamiec, C., Astruc, T., Baéza-Campone, E., Bouillot, P.E., Clinquart, A., Feidt, C., Fourat, E., Gautron, J., Girard, A., Guillier, L., Kesse-Guyot, E., Lebret, B., Lefèvre, F., Le Perchec, S., Martin, B., Mirade, P.S., Pierre, F., Raulet, M., Rémond, D., Sans, P., Souchon, I., Donnars, C., Santé-Lhoutellier, V. 2022. Review: Quality of animal-source foods. Animal 16 Suppl 1: 100376 [DOI]

Prado, E., Eklouh-Molinier, C., Enez, F., Causeur, D., Blay, C., Dupont-Nivet, M., Labbé, L., Petit, V., Moreac, A., Taupier, G., Haffray, P., Bugeon, J., Corraze, G., Nazabal, V. 2022. Prediction of fatty acids composition in the rainbow trout Oncorhynchus mykiss by using Raman micro-spectroscopy. Analytica Chimica Acta 1191:339212 [DOI]

Schnebert, S., Goguet, M., Velez, E.J., Depince, A., Beaumatin, F., Herpin, A., Seiliez, I. 2022. Diving into the Evolutionary History of HSC70-Linked Selective Autophagy Pathways: Endosomal Microautophagy and Chaperone-Mediated Autophagy. Cells 11(12) [DOI]

Segret, E., Cardona, E., Skiba-Cassy, S., Cachelou, F., Bobe, J. 2022. Effect of a low water concentration in chloride, sodium and potassium on oocyte maturation, oocyte hydration, ovulation and egg quality in rainbow trout. Aquaculture 546: Article Number 737374 [DOI]

van Gelderen, T.A., Montfort, J., Álvarez-Dios, J.A., Thermes, V., Piferrer, F., Bobe, J., Ribas, L. 2022. Deciphering sex-specific miRNAs as heat-recorders in zebrafish. Scientific Reports 12(1):18722 [DOI]

Wen, M., Pan, Q., Jouanno, E., Montfort, J., Zahm, M., Cabau, C., Klopp, C., Iampietro, C., Roques, C., Bouchez, O., Castinel, A., Donnadieu, C., Parrinello, H., Poncet, C., Belmonte, E., Gautier, V., Avarre, J.C., Dugue, R., Gustiano, R., Hà, T.T.T., Campet, M., Sriphairoj, K. Ribolli, J., de Almeida, F.L., Desvignes, T., Postlethwait, J.H., Floi Bucao, C., Robinson-Rechavi, M., Bobe, J., Herpin, A., Guiguen, Y. 2022. An ancient truncated duplication of the anti-Mullerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family. Molecular Ecology Resources 22(6):2411-2428 [DOI]

Wen, M., Pan., Q, Larson., W, Eché., C, Guiguen, Y. 2022. Characterization of the sex determining region of channel catfish (Ictalurus punctatus) and development of a sex-genotyping test. Gene 30;850:146933 [DOI]