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Publications 2016

Articles and book chapters published in 2016 (update January 2017)


Adolfi, M. C., Herpin, A., Regensburger, M., Sacquegno, J., Waxman, J. S., Schartl, M. 2016. Retinoic acid and meiosis induction in adult versus embryonic gonads of medaka. Scientific Reports 6 : 1-13 [DOI]

Bertho, S., Pasquier, J., Pan, Q., Le Trionnaire, G., Bobe, J., Postlethwait, J.H., Pailhoux, E., Schartl, M., Herpin, A., Guiguen, Y. 2016. Foxl2 and its relatives are evolutionary conserved players in gonadal sex differentiation. Sexual Development 10(3): 111-129 [DOI]

Braasch, I., Gehrke, A. R., Smith, J. J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A. M., Campbell, M. S., Barrell, D., Martin, K. J., Mulley, J. F., Ravi, V., Lee, A. P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F. E., Sun, Y., Hertel, J., Beam, M. J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J. H., Litman, G. W., Litman, R. T., Mikami, M., Ota, T., Saha, N. R., Williams, L., Stadler, P. F., Wang, H., Taylor, J. S., Fontenot, Q., Ferrara, A., Searle, S. M., Aken, B., Yandell, M., Schneider, I., Yoder, J. A., Volff, J.-N., Meyer, A., Amemiya, C. T., Venkatesh, B., Holland, P. W., Guiguen, Y., Bobe, J., Shubin, N. H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J. H. 2016 . The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics 1-13 [DOI]

De Mello, F., Garcia, J. S., Depince, A., Labbe, C., Streit Junior, D. P. 2016. DNA isolation from fresh and cryopreserved semen of Tambaqui (Colossoma macropomum).Journal of 10(2)

Désert, C., Merlot, E., Zerjal, T., Bed'Hom, B., Härtle, S., Le Cam, A., Roux, P.-F., Baeza, E., Gondret, F., Duclos, M., Lagarrigue, S. 2016. Transcriptomes of whole blood and PBMC in chickens. Comparative Biochemistry and Physiology. Part D, Genomics and Proteomics 20: 1-9 [DOI]

Geffroy, B., Guilbaud, F., Amilhat, E., Beaulaton, L., Vignon, M., Huchet, E., Rives, J., Bobe, J., Fostier, A., Guiguen, Y., Bardonnet, A. 2016. Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context. Scientific Reports 6, Article number: 34041 [DOI]

Juanchich, A., Bardou, P., Rué, O., Gabillard, J.-C., Gaspin, C., Bobe, J., Guiguen, Y. 2016. Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing. BMC Genomics 17(164): 1-12 [DOI]

Lefèvre, F., Cos, I., Pottinger, T. G., Bugeon, J. 2016. Selection for stress responsiveness and slaughter stress affect flesh quality in pan-size rainbow trout, Oncorhynchus mykiss. Aquaculture  464 : 654-664 [DOI]

Listrat, A., Lebret, B., Louveau, I., Astruc, T., Bonnet, M., Lefaucheur, L., Picard, B., Bugeon, J. 2016. How muscle structure and composition influence meat and flesh quality. The Scientific World Journal 2016 (3182746): 1-14 [DOI]

Montfort, J., Le Cam, A., Gabillard, J.C., Rescan, P.Y. 2016. Gene expression profiling of trout regenerating muscle reveals common transcriptional signatures with hyperplastic growth zones of the post-embryonic myotome. BMC Genomics, 17(810): 1-12 [DOI]

Pan, Q., Anderson, J., Bertho, S., Herpin, A., Wilson, C., Postlethwait, J. H., Schartl, M., Guiguen, Y. 2016. Vertebrate sex-determining genes play musical chairs. Comptes Rendus. Biologies 339(7-8): 258-262 [DOI]

Pasquier, J., Cabau, C., Nguyen, T. T. V., Jouanno, E., Severac, D., Braasch, I., Journot, L., Pontarotti, P., Klopp, C., Postlethwait, J. H., Guiguen, Y., Bobe, J. 2016. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. BMC Genomics 17(368): 1-10 [DOI]

Sadoul, B., Foucard, A., Valotaire, C., Labbé, L., Goardon, L., LeCalvez, J.M., Médale, F., Quillet, E., Dupont-Nivet, M., Geurden, I., Prunet, P., Colson, V. 2016. Adaptive capacities from survival to stress responses of two isogenic lines of rainbow trout fed a plant-based diet. Scientific Reports 6 Article Number:35957 [DOI]

Teichert, N., Valade, P., Fostier, A., Grondin, H., Gaudin, P. 2016. Reproductive biology of an endemic amphidromous goby, Cotylopus acutipinnis, from La Réunion Island. Marine and Freshwater Research 67 (4): 526-536 [DOI]

Vandeputte, M., Porte, J., Auperin, B., Dupont-Nivet, M., Vergnet, A., Valotaire, C., Claireaux, G., Prunet, P., Chatain, B. 2016 . Quantitative genetic variation for post-stress cortisol and swimming performance in growth-selected and control populations of European sea bass (Dicentrarchus labrax). Aquaculture 455: 1-7 [DOI]

Zhang, X., Guan, G.J., Li, M.Y., Zhu, F., Liu, Q.Z., Naruse, K., Herpin, A., Nagahama, Y., Li, J.L., Hong, Y.H. 2016. Autosomal gsdf acts as a male sex initiator in the fish medaka. Scientific Reports 6 Article Number: 19738 [DOI]

Meeting Abstracts indexed in Web of Science database

Schartl, M., Kneitz, S., Roco, A., Kottler, V.A., Anderson, J., Schories, S., Nanda, I., Schmid, M., Volff, J.N., Postlethwait, J.H., Guiguen, Y. 2016. Molecular differentiation markers for the analyses of sex determination diversity and sex chromosome evolution in fish. Cytogenetic and Genome Research 148(2-3): 100-100 - Meeting Abstract: II.23

Book Chapter

Bobe, J., Marandel, L., Panserat, S., Boudinot, P., Bethelot Camille, Quillet, E., Volff, J.-N., Genet, C., Jaillon, O., Roest Crollius, H., Guiguen, Y. 2016. The rainbow trout genome, an important landmark for aquaculture and genome evolution. In: Simon MacKenzie, Sissel Jentoft, Genomics in Aquaculture (p. 2, 21-43). Amsterdam, NLD : Academic Press.