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INRAE

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Last update: May 2021

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Publications

2021

Burstin J, Avia K, Carillo-Perdomo E, Lecomte C, Beji S, Hanocq E, Aubert G, Tayeh N, Klein A, Geffroy V, Le Signor C, Pflieger S, Dalmais M, Desgroux A, Lavaud C, Quillévéré-Hamard A, Kreplak J, Lejeune-Hénaut I, Bourion V, Pilet-Nayel ML, Leveugle M, Pinochet X, Thompson R & the PeaMUST Consortium (2021). PeaMUST (Pea MultiStress Tolerance), a multidisciplinary French project uniting researchers, plant breeders, and the food industry. Legume Science : e108

Guyon-Debast A, Alboresi A, Terret Z, Charlot F, Berthier F, Vendrell-Mir P, Casacuberta JM, Veillet F, Morosinotto T, Gallois JL & Nogue F (2021). A blueprint for gene function analysis through Base Editing in the model plant Physcomitrium (Physcomitrella) patens. New Phytologist, 230(3), 1258-1272

Malabarba J, Chevreau E, Dousset N, Veillet F, Moizan J & Vergne E (2021). New Strategies to Overcome Present CRISPR/Cas9 Limitations in Apple and Pear: Efficient Dechimerization and Base Editing. International Journal of Molecular Sciences, 22(1), 319

Moury B, Audergon J-M, Baudracco-Arnas S, Ben Krima S, Bertrand F, Boissot N, Buisson M, Caffier V, Cantet M, Chanéac S, Constant C, Delmotte F, Dogimont C, Doumayrou J, Fabre F, Fournet S, Grimault V, Jaunet T, Justafré I, Lefebvre V, Losdat D, Marcel T, Montarry J, Morris CE, Omrani M, Paineau M, Perrot S, Pilet-Nayel ML & Ruellan Y (2021). The quasi-universality of nestedness in the structure of quantitative plant-parasite interactions. Peer Community In Evolutionary Biology

Pilet-Nayel ML, Moussart A, Chatterton S, & Malvick DK (2021). Aphanomyces root rot. In B. Harveson, J. Pasche, M. Burrows, L. Porter, & W. Chen (Eds.), Compendium of pea diseases and pests (3d edition ed.). USA: The American Phytological Society, St-Paul, Minnesota, USA.

Quillévéré-Hamard A, Le Roy G, Lesné A, Le May C & Pilet-Nayel ML (2021). Aggressiveness of Diverse French Aphanomyces euteiches Isolates on Pea Near Isogenic Lines Differing in Resistance Quantitative Trait Loci. Phytopathology, 111(4), 695-702.

2020

Clot CR, Polzer C, Prodhomme C, Schuit C, Engelen CJM, Hutten RCB & van Eck HJ (2020). The origin and widespread occurrence of Sli-based self-compatibility in potato. Theoretical and Applied Genetics, 133(9), 2713-2728.

Veillet F, Durand M, Kroj T, Cesari S & Gallois JL (2020) Precision breeding made real with CRISPR: illustration through genetic resistance to pathogens. Plant communications, 1(5)

Veillet F, Kermarrec MP, Chauvin L, Chauvin JE & Nogué F (2020). CRISPR-induced indels and base editing using the Staphylococcus aureus Cas9 in potato. PLOS ONE, 15(8), e0235942

Veillet F, Perrot L, Guyon-Debast A, Kermarrec MP, Chauvin L, Chauvin JE, Gallois JL, Mazier M & Nogué F (2020) Expanding the CRISPR Toolbox in P. patens Using SpCas9-NG Variant and Application for Gene and Base Editing in Solanaceae Crops. International Journal of Molecular Sciences, 21(3), 1024

2019

Billard E, Quillévéré-Hamard A, Lavaud C, Pilet-Nayel ML & Le May C (2019). Testing of life history traits of a soilborne pathogen in vitro: Do characteristics of oospores change according the strains of Aphanomyces euteiches and the host plant infected by the pathogen? Journal of Phytopathology, 167(6), 313-320

Bonhomme M, Fariello MI, Navier H, Hajri A, Badis Y, Miteul H, Samac DA, Dumas B, Baranger A, Jacquet C & Pilet-Nayel ML (2019). A local score approach improves GWAS resolution and detects minor QTL: application to Medicago truncatula quantitative disease resistance to multiple Aphanomyces euteiches isolates. Heredity, 123(4), 517-531

Coyne CJ, Porter LD, Boutet G, Ma Y, McGee RJ, Lesné A, Baranger A & Pilet-Nayel ML (2019). Confirmation of Fusarium root rot resistance QTL Fsp-Ps 2.1 of pea under controlled conditions. Bmc plant biology, 19(1)

Magrini MB, Cabanac G, Lascialfari M, Plumecocq G, Amiot M-J, Anton M, Arvisenet G, Baranger A, Bedoussac L, Chardigny J-M, Duc G, Jeuffroy M-H, Journet E-P, Juin H, Larré C, Leiser H, Micard V, Millot D, Pilet-Nayel M L, Nguyen-Thé C, Salord T, Voisin A-S, Walrand S & Wery J (2019). Peer-Reviewed Literature on Grain Legume Species in the WoS (1980–2018): A Comparative Analysis of Soybean and Pulses. Sustainability, 11(23), 6833

Nogué F, Vergne P, Chèvre AM, Chauvin JE, Bouchabke-Coussa O, Dejardin A, Chevreau E, Hibrand-Saint Oyant L, Mazier M, Barret P, Guiderdoni E, Sallaud C, Foucrier S, Devaux P & Rogowsky PM (2019). Crop plants with improved culture and quality traits for food, feed and other uses. Transgenic Research, 28, 65-73

Veillet F, Chauvin L, Kermarrec MP, Sevestre F, Merrer M, Terret Z, Szydlowski N, Devaux P, Gallois JL & Chauvin JE (2019). The Solanum tuberosum GBSSI gene: a target for assessing gene and base editing in tetraploid potato. Plant Cell Reports, 38(9), 1065-1080

Veillet F, Perrot L, Chauvin L, Kermarrec MP, Guyon-Debast A, Chauvin JE, Nogué F & Mazier M (2019). Transgene-Free Genome Editing in Tomato and Potato Plants Using Agrobacterium-Mediated Delivery of a CRISPR/Cas9 Cytidine Base Editor. International Journal of Molecular Sciences, 20(2), 402

 

2018

Desgroux A, Baudais V N, Aubert V, Le Roy G, de Larambergue H, Miteul H, Aubert G, Boutet G, Duc G, Baranger A, Burstin J, Manzanares-Dauleux MJ, Pilet-Nayel ML & Bourion V (2018). Comparative Genome-Wide-Association Mapping Identifies Common Loci Controlling Root System Architecture and Resistance to Aphanomyces euteiches in Pea. Frontiers in Plant Science, 8(2195). 

Fournet S, Eoche-Bosy D, Kerlan MC, Grenier E & Montarry J (2018). Phenotypic and Genomic Modifications Associated with Globodera pallida Adaptation to Potato Resistances. Potato Research, 61(1), 65-71

Le May C, Onfroy C, Moussart A, Andrivon D, Baranger A, Pilet-Nayel ML & Vandemark G (2018). Genetic structure of Aphanomyces euteiches populations sampled from United States and France pea nurseries. European Journal of Plant Pathology, 150(2), 275-286

Quillévéré-Hamard A, Le Roy G, Moussart A, Baranger A, Andrivon D, Pilet-Nayel ML & Le May C (2018). Genetic and Pathogenicity Diversity of Aphanomyces euteiches Populations from Pea-Growing Regions in France. Frontiers in Plant Science, 9, 1673

 

2017

Le Hingrat Y, Quéré B, Andrivon D & Kerlan MC (2017). Report on the Workshop “Research Challenges for the Seed Potato Sector”. Potato Research, 60(3-4), 331-335

Pilet-Nayel ML, Moury B, Caffier V, Montarry J, Kerlan MC, Fournet S, Durel CE & Delourme R (2017) Quantitative Resistance to Plant Pathogens in Pyramiding Strategies for Durable Crop Protection Frontiers in Plant Science, 8(1838), 1838

 

2016

Boutet G, Alves Carvalho S, Falque M, Peterlongo P, Lhuillier E, Bouchez O, Lavaud C, Pilet-Nayel ML, Rivière N & Baranger A (2016) SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population BMC Genomics, 17, 121 

Desgroux A, L’Anthoëne V, Roux-Duparque M, Rivière JP, Aubert G, Tayeh N, Moussart A, Mangin P, Vetel P, Piriou C, McGee R J, Coyne C J, Burstin J, Baranger A, Manzanares-Dauleux MJ, Bourion V & Pilet-Nayel ML (2016) Genome-wide association mapping of partial resistance to Aphanomyces euteiches in pea BMC Genomics, 17(1), 1-21

Esnault F, Pellé R, Dantec JP, Bérard A, Le Paslier MC & Chauvin JE (2016) Development of a Potato Cultivar (Solanum tuberosum L) Core Collection, a Valuable Tool to Prospect Genetic Variation for Novel Traits Potato Research, 59(4), 329-343

Lavaud C, Baviere M, Le Roy G, Hervé RM, Moussart A, Delourme R & Pilet-Nayel ML (2016) Single and multiple resistance QTL delay symptom appearance and slow down root colonization by Aphanomyces euteiches in pea near isogenic lines Bmc plant biology, 16(1), 116

Meziadi C, Blanchet S, Richard MM, Pilet-Nayel ML, Geffroy V & Pflieger S (2016) Bean pod mottle virus: a new powerful tool for functional genomics studies in Pisum sativum Plant Biotechnology Journal, 14(8), 1777-1787

Mieuzet L, Quillévéré A, Pilet-Nayel ML & Le May C (2016) Development and characterization of microsatellite markers for the oomyceta Aphanomyces euteiches Fungal Genetics and Biology, 91, 1-5

 

2015

Lavaud C, Lesné A, Piriou C, Le Roy G, Boutet G, Moussart A, Poncet C, Delourme R, Baranger A & Pilet-Nayel ML (2015) Validation of QTL for resistance to Aphanomyces euteiches in different pea genetic backgrounds using near-isogenic lines Theoretical and Applied Genetics, 128(11), 2273-2288 

Coyne CJ, Pilet-Nayel ML, McGee RJ, Porter LD, Smýkal P & Grünwald NJ (2015) Identification of QTL controlling high levels of partial resistance to Fusarium solani f sp pisi in pea Plant Breeding, 134(4), 446-443

Tayeh N, Aluome C, Falque M, Jacquin F, Klein A, Chauveau A, Bérard A, Houtin H, Rond C, Kreplak J, Boucherot K, Martin C, Baranger A, Pilet-Nayel ML, Warkentin T D, Brunel D, Marget P, Le Paslier M C, Aubert G & Burstin J (2015) Development of two major resources for pea genomics: the GenoPea 132K SNP Array and a high density, high resolution consensus genetic map The Plant Journal, 84(6), 1257–1273

Tayeh N, Aubert G, Pilet-Nayel M L, Lejeune-Hénaut I, Warkentin TD & Burstin J (2015) Genomic tools in pea breeding programs: status and perspectives Frontiers in Plant Science, 6, 1037

CV IdHAL Scientists:

https://cv.archives-ouvertes.fr/marie-laure-pilet-nayel

https://cv.archives-ouvertes.fr/marie-claire-kerlan

https://cv.archives-ouvertes.fr/jean-eric-chauvin

https://cv.archives-ouvertes.fr/florence-esnault

https://cv.archives-ouvertes.fr/laura-chauvin

https://cv.archives-ouvertes.fr/sylvie-marhadour

CV IdHAL PhD students:

https://cv.archives-ouvertes.fr/theo-leprevost